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“We really, really did it!”: Human genome finally completed

<p dir="ltr">Scientists say they have finally mapped the entire human genome, 20 years after it was first celebrated around the world.</p> <p dir="ltr">A team of international researchers have been able to fill in the gaps in the sequence that contains all of the genetic information humans need to function.</p> <p dir="ltr">The scientists worked together as part of the Telomere to Telomere (T2T) consortium and presented a gap-free sequence of the roughly three billion bases (or “letters”) in DNA.</p> <p dir="ltr">These letters, known as A, C, G and T, form pairs that are strung together to form genes and can include instructions for making proteins which are then used for everything from repairing tissue and helping our immune systems function to providing structure for our cells and allowing our bodies to move.</p> <p dir="ltr">The new research comes after the first draft of the human genome was announced in 2000, which was incomplete because technology to sequence DNA wasn’t able to read certain parts of it.</p> <p dir="ltr">These parts included really long, highly repetitive sequences of the letters which have been described as “junk DNA”.</p> <p dir="ltr">As technology evolved and the genome continued to be updated, about eight percent of the DNA in the genome was still unknown - until now.</p> <p dir="ltr">“Some of the genes that make us uniquely human were actually in this ‘dark matter of the genome’ and were totally missed,” Evan Eichler, a University of Washington researcher who was involved in the current research and the original Human Genome Project, told <em><a href="https://www.nzherald.co.nz/world/scientists-finally-finish-decoding-entire-human-genome/2YQLOXHMWP5TWJJ6HW24WH5QGA/" target="_blank" rel="noopener">NZ Herald</a></em>.</p> <p dir="ltr">“It took 20-plus years, but we finally got it done.”</p> <p dir="ltr">Many - including Eicher’s own students - thought the genome had been completed by now, making the latest achievement even more surprising.</p> <p dir="ltr">“I was teaching them, and they said, ‘Wait a minute. Isn’t this like the sixth time you guys have declared victory?’ I said, ‘No, this time we really, really did it!’”</p> <p><span id="docs-internal-guid-2005b113-7fff-3fcf-efca-0f8f8e295010"></span></p> <p dir="ltr">The research is so significant it even prompted Eichler to write his first ever tweet announcing it.</p> <blockquote class="twitter-tweet"> <p dir="ltr" lang="en">It only took a complete human genome for <a href="https://twitter.com/EichlerEE?ref_src=twsrc%5Etfw">@EichlerEE</a> actually make his first twitter post. I think this means we can expect more posts from him in the future as long as <a href="https://twitter.com/aphillippy?ref_src=twsrc%5Etfw">@aphillippy</a> <a href="https://twitter.com/sergeynurk?ref_src=twsrc%5Etfw">@sergeynurk</a> <a href="https://twitter.com/sergekoren?ref_src=twsrc%5Etfw">@sergekoren</a> <a href="https://twitter.com/ArangRhie?ref_src=twsrc%5Etfw">@ArangRhie</a> <a href="https://twitter.com/MikkoRautiaine3?ref_src=twsrc%5Etfw">@MikkoRautiaine3</a> finish some more genomes! <a href="https://t.co/aDSwBt6gW1">https://t.co/aDSwBt6gW1</a></p> <p>— Mitchell R. Vollger (@mrvollger) <a href="https://twitter.com/mrvollger/status/1509606815184547841?ref_src=twsrc%5Etfw">March 31, 2022</a></p></blockquote> <p dir="ltr">Karen Miga, another of the authors of the six studies released on Thursday, said having a complete picture of the genome would further the understanding of our evolution and pave the way for medical discoveries in areas such as ageing, cancer, and neurodegenerative conditions.</p> <p dir="ltr">“We’re just broadening our opportunities to understand human disease,” Miga said.</p> <p dir="ltr">Before now, Miga said the gaps in the map of the genome were “large and persistent” and in “pretty important regions”.</p> <p dir="ltr">The hugely collaborative work, including researchers from the University of California, the University of Washington, and the National Human Genome Research Institute, also corrects previous errors in the map.</p> <p dir="ltr">“This is a major improvement, I would say, of the Human Genome Project,” said geneticist Ting Wang, who wasn’t involved in the studies.</p> <p dir="ltr">It also turned out that these unknown stretches of DNA also contain some that play an important role in evolution and disease, and even some that are integral to making our brains larger than a chimp’s.</p> <p dir="ltr">Reading genes requires scientists to cut strands of DNA into pieces, which sequencing machines then read letter by letter. With the strands being anywhere from hundreds to thousands of letters long, scientists are then tasked with reordering the pieces so they are correct - a tough task when there are lots of repeating letters.</p> <p dir="ltr"><span id="docs-internal-guid-bcb131c9-7fff-607b-e482-d45983d9d97c"></span></p> <p dir="ltr">With technology now allowing for the genome to be complete, future research will look to map even more genomes and collect genes from both parents.</p> <p dir="ltr"><em>Image: Getty Images</em></p>

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The key to understanding healthy ageing

<p>The genes of thousands of older Australians who have no history of disease are undergoing sequencing at the Garvan Institute to contribute to the Medical Genome Reference Bank. The database is expected to be finished early next year and will be opened to researchers around the globe as a resource to discover the genetic factors that contribute to healthy ageing.</p> <p>A genome refers to all the genetic information of an individual that is inherited from their parents and it is encoded within DNA. This genome bank is the largest in the world and unlike many other genome banks, which store data on people with health concerns, this bank will analyse healthy genomes so scientists can understand what healthy ageing looks like.</p> <p>To get a better idea of how beneficial this new bank of genome data will be, Over60 spoke to the project co-leader, Associate Professor Marcel Dinger, about three advantages the Reference Bank will have for healthy ageing.</p> <p><strong>1. Filtering disease and non-disease-causing variants</strong></p> <p>The reference bank will be used to compare genomes from people with no disease history with those who have had disease to filter disease and non-disease variants. This will provide an ultimate genetic reference of what a healthy genome is and allow researchers to understand the genetic reason as to why some people do not get cancer and other diseases.</p> <p>“The primary motivation of the database is that it helps filter out those millions of variants that are what we call benign, they don’t have an impact on health and are just part of what makes each of us different,” Associate Professor Dinger said.</p> <p>This genomic data will allow experts to research whether healthy individuals are depleted of genetic variations that can cause neurological or cardiovascular disease or, if they have a genetic advantage that has a protective effect against diseases.</p> <p>This then “opens the opportunity for developing new therapeutics and may make it possible for other people to live longer if we understand the cause.”</p> <p><strong>2. Identifying people at risk</strong></p> <p>“In the long term, it can help predict who is susceptible to disease, identify those people most at risk who can then be enrolled in screening programs,” Associate Professor Dinger explained.</p> <p>Associate Professor Dinger hopes that in the future, an individual at birth could be tested to see if they have diseasing causing variants. If they did, they could then have early intervention to prevent the disease.</p> <p>“I think what we might see as a general trend, is genomic sequencing moving from being used to diagnose patients – individuals that already have a disease – towards preventative medicine where you are able to anticipate disease or an individual’s predisposition to disease,” he said.</p> <p>“Normally, you only go to a doctor when you are sick whereas I think in the future, that genomics will start to play more of a role in disease prevention and health management.”</p> <p><strong>3. Interpreting the non-coding parts of the genome</strong></p> <p>The genome is broken down into two parts of genetic material: the protein coding parts and the non-coding part of the genome. Associate Professor Dinger expects the Medical Genome Reference Bank will allow experts to interpret the non-coding parts of the genome, which is currently not well understood. “I think we will find a lot of the causes of disease, especially more complex disease, in the non-coding part of the genome, which tend to be responsible for controlling which genes are expressed and when. That’s a very new area for genomics,” he said.</p> <p>As more research is undertaken to identify disease-causing variants, Associate Professor Dinger believes that genomic data will have a transformative impact on the medical world in the immediate future.</p> <p>“Having genetic information available at the beginning of a person’s life has this enormous potential both to improve the quality of care and the efficiency of treatment for people with disease.”</p> <p>For more information or to support Garvan’s research into Genomes, please visit <span style="text-decoration: underline;"><strong><a href="https://www.garvan.org.au/foundation/our-work/genomics/%20" target="_blank">garvan.org.au</a></strong></span>.       </p> <p>THIS IS SPONSORED CONTENT BROUGHT TO YOU IN CONJUNCTION WITH THE <span style="text-decoration: underline;"><a href="https://www.garvan.org.au/" target="_blank"><strong>GARVAN INSTITUTE</strong></a></span> OF MEDICAL RESEARCH.</p> <div data-fsid="e.594b07a33b03300100460550" data-width="100%" data-height="auto"></div>

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